STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4527PFAM: putative esterase; KEGG: pat:Patl_2339 putative esterase. (358 aa)    
Predicted Functional Partners:
Slin_4524
Biotin carboxylase-like protein; KEGG: bph:Bphy_7724 putative biotin carboxylase.
 
     0.843
Slin_1314
KEGG: scl:sce4393 hypothetical protein.
  
     0.754
Slin_1338
KEGG: scl:sce3586 hypothetical protein.
 
     0.754
Slin_1340
PFAM: putative esterase; KEGG: mxa:MXAN_7021 putative esterase.
 
     0.751
Slin_1315
GMP synthase - Glutamine amidotransferase domain- like protein; KEGG: scl:sce3772 hypothetical protein.
  
     0.747
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
 
     0.648
Slin_1316
Glutamate--cysteine ligase GCS2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
     0.612
Slin_4528
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pat:Patl_0424 response regulator receiver protein.
       0.574
Slin_2883
PFAM: alpha amylase catalytic region; Cyclomaltodextrinase; Cyclo-malto-dextrinase-like; SMART: alpha amylase catalytic sub domain; KEGG: cja:CJA_0735 alpha-amylase, putative, amy13E; Belongs to the glycosyl hydrolase 13 family.
     0.569
Slin_3791
PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mll6746 pristinamycin I synthase 3.
  
    0.559
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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