STRINGSTRING
Slin_4655 protein (Spirosoma linguale) - STRING interaction network
"Slin_4655" - Linoleoyl-CoA desaturase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4655Linoleoyl-CoA desaturase (381 aa)    
Predicted Functional Partners:
Slin_4654
HxlR family transcriptional regulator (110 aa)
              0.856
Slin_4656
Cyclopropane-fatty-acyl-phospholipid synthase (301 aa)
              0.686
Slin_4657
Transglutaminase (289 aa)
              0.608
Slin_1648
Hypothetical protein (124 aa)
   
          0.555
Slin_5188
Oxidoreductase FAD/NAD(P)-binding domain-containing protein (356 aa)
 
   
  0.543
Slin_3235
Hypothetical protein (154 aa)
   
          0.531
Slin_5128
Oxidoreductase FAD/NAD(P)-binding domain-containing protein (351 aa)
   
   
  0.480
Slin_5875
Hypothetical protein (134 aa)
   
          0.457
Slin_4403
Class I and II aminotransferase (405 aa)
   
        0.405
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (19%) [HD]