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Slin_4769 protein (Spirosoma linguale) - STRING interaction network
"Slin_4769" - Stress responsive alpha-beta barrel domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4769Stress responsive alpha-beta barrel domain-containing protein (135 aa)    
Predicted Functional Partners:
Slin_4768
Hypothetical protein (62 aa)
              0.664
Slin_5741
NUDIX hydrolase (226 aa)
   
          0.623
Slin_5285
NUDIX hydrolase (228 aa)
   
          0.599
Slin_0511
Dehydrogenase (1265 aa)
   
          0.573
Slin_5988
Hypothetical protein (371 aa)
   
          0.472
Slin_5373
NmrA family protein (304 aa)
   
          0.471
Slin_5049
Inosine/uridine-preferring nucleoside hydrolase (333 aa)
   
          0.467
Slin_5811
Dehydrogenase (1040 aa)
   
          0.448
Slin_3971
Hypothetical protein (595 aa)
   
          0.418
Slin_0959
Hypothetical protein (776 aa)
   
          0.416
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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