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Slin_4817 protein (Spirosoma linguale) - STRING interaction network
"Slin_4817" - Sigma 54 interacting domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4817Sigma 54 interacting domain-containing protein (208 aa)    
Predicted Functional Partners:
Slin_5020
Hypothetical protein (418 aa)
 
  0.991
Slin_0794
Hypothetical protein (412 aa)
  0.982
Slin_4653
Hypothetical protein (413 aa)
  0.980
Slin_2349
Hypothetical protein (415 aa)
 
  0.975
Slin_6331
ABC transporter (593 aa)
 
  0.964
Slin_1094
ABC transporter (584 aa)
 
  0.963
Slin_1469
ABC transporter (586 aa)
 
  0.958
Slin_1762
ABC transporter (218 aa)
   
   
 
0.952
Slin_0799
ABC transporter (353 aa)
   
0.951
Slin_1095
ABC transporter (587 aa)
 
0.949
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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