STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4920Hypothetical protein. (506 aa)    
Predicted Functional Partners:
Slin_4921
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mxa:MXAN_2922 sugar transferase.
       0.663
Slin_5097
PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: ppg:PputGB1_0186 hypothetical protein.
  
    0.643
Slin_2543
Membrane protein-like protein; KEGG: dal:Dalk_2331 hypothetical protein.
  
     0.623
Slin_4936
PFAM: lipopolysaccharide biosynthesis protein; KEGG: gme:Gmet_1346 lipopolysaccharide biosynthesis.
 
     0.619
Slin_0326
Mg-chelatase subunit ChlI-like protein; KEGG: Os03g0811100; hypothetical protein.
  
 
 0.608
Slin_4078
PFAM: lipopolysaccharide biosynthesis protein; KEGG: cvi:CV_0772 hypothetical protein.
  
     0.593
Slin_2569
Hypothetical protein; KEGG: im:7151086; si:ch211-250g4.3.
  
     0.567
Slin_2001
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: SLEI family protein.
 
   
 0.550
Slin_4988
PFAM: Colicin V production protein; KEGG: par:Psyc_1283 colicin V production protein.
  
     0.535
Slin_5747
KEGG: shm:Shewmr7_0088 hypothetical protein.
 
   
 0.534
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.