STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4927PFAM: glycosyl transferase family 2; KEGG: apa:APP7_1479 glycosyl transferase, group 2 family protein. (309 aa)    
Predicted Functional Partners:
Slin_4928
PFAM: glycosyl transferase family 2; KEGG: vsa:VSAL_I3027 putative glycosyltransferase.
 
     0.785
Slin_4930
KEGG: gsu:GSU0633 glycosyl transferase, group 2 family protein.
 
     0.751
Slin_4929
KEGG: tau:Tola_2047 hypothetical protein.
       0.718
Slin_4931
PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3219 glycosyl transferase family protein.
 
     0.654
Slin_2571
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gur:Gura_2358 ABC transporter related.
 
  
 0.486
Slin_2570
PFAM: ABC-2 type transporter; KEGG: ppd:Ppro_2109 ABC-2 type transporter.
 
  
 0.481
Slin_4932
PFAM: glycosyl transferase family 2; KEGG: fph:Fphi_1478 glycosyl transferase family protein.
 
     0.471
Slin_2463
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gur:Gura_2358 ABC transporter related.
 
  
 0.469
Slin_4921
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mxa:MXAN_2922 sugar transferase.
  
 0.440
Slin_3852
PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_2884 glycosyl transferase family protein.
  
     0.435
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.