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Slin_4966 protein (Spirosoma linguale) - STRING interaction network
"Slin_4966" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4966Hypothetical protein (450 aa)    
Predicted Functional Partners:
Slin_4962
Hypothetical protein (398 aa)
 
          0.895
Slin_4959
Hypothetical protein (315 aa)
 
        0.894
Slin_4961
Hypothetical protein (257 aa)
 
          0.892
Slin_4958
RDD domain-containing protein (231 aa)
 
          0.885
Slin_4960
Hypothetical protein (296 aa)
 
          0.880
Slin_4963
ATPase AAA (329 aa)
 
   
  0.837
Slin_0429
Hypothetical protein (636 aa)
   
          0.633
Slin_3336
Hypothetical protein (360 aa)
   
          0.617
Slin_6416
Hypothetical protein (364 aa)
   
          0.590
Slin_0031
Hypothetical protein (345 aa)
   
          0.583
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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