STRINGSTRING
Slin_5025 protein (Spirosoma linguale) - STRING interaction network
"Slin_5025" - Crp/Fnr family transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5025Crp/Fnr family transcriptional regulator (1056 aa)    
Predicted Functional Partners:
Slin_5021
Adenylate/guanylate cyclase (348 aa)
 
  0.983
Slin_5936
Major intrinsic protein (241 aa)
   
 
  0.943
Slin_2523
Major intrinsic protein (279 aa)
   
 
  0.943
Slin_4050
Type III restriction protein res subunit (453 aa)
     
 
    0.889
Slin_1833
Hypothetical protein (476 aa)
 
  0.802
Slin_2968
Serine/threonine protein kinase (741 aa)
   
  0.788
Slin_2543
Hypothetical protein (607 aa)
   
          0.759
Slin_4538
Hypothetical protein (225 aa)
   
  0.757
Slin_1282
Serine/threonine protein kinase (517 aa)
   
  0.755
Slin_5230
PKD domain-containing protein (1222 aa)
   
          0.755
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (12%) [HD]