STRINGSTRING
Slin_5068 protein (Spirosoma linguale) - STRING interaction network
"Slin_5068" - Acyltransferase family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5068Acyltransferase family protein (419 aa)    
Predicted Functional Partners:
Slin_5067
Oxidoreductase domain-containing protein (452 aa)
              0.593
Slin_1913
Hypothetical protein (215 aa)
   
          0.539
Slin_3336
Hypothetical protein (360 aa)
   
          0.489
Slin_3848
Response regulator receiver protein (107 aa)
   
          0.456
Slin_4663
PA-phosphatase-like phosphoesterase (515 aa)
   
          0.454
Slin_4135
Hypothetical protein (291 aa)
   
          0.454
Slin_0191
LytTR family transcriptional regulator (234 aa)
   
          0.442
Slin_2514
Hypothetical protein (142 aa)
   
          0.433
Slin_4660
PA-phosphatase-like phosphoesterase (502 aa)
   
          0.418
Slin_6416
Hypothetical protein (364 aa)
   
          0.416
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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