STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5108KEGG: hch:HCH_03033 hypothetical protein. (387 aa)    
Predicted Functional Partners:
Slin_5503
KEGG: hypothetical protein.
  
     0.695
Slin_4556
Hypothetical protein.
  
     0.665
Slin_3266
KEGG: ccs:CCNA_01036 hypothetical protein.
  
     0.622
Slin_1223
PFAM: lipolytic protein G-D-S-L family; KEGG: pat:Patl_0828 lipolytic enzyme, G-D-S-L.
  
     0.615
Slin_3396
PFAM: phosphoesterase; KEGG: bpd:BURPS668_A2873 putative lipoprotein.
  
     0.606
Slin_6292
PFAM: PA14 domain protein; NHL repeat containing protein; SMART: PA14 domain protein; KEGG: scl:sce2099 hypothetical protein.
  
 
   0.582
Slin_6571
PFAM: Ig family protein; NHL repeat containing protein; SMART: Dystroglycan-type cadherin domain protein; KEGG: lch:Lcho_3739 outer membrane adhesin like proteiin.
  
     0.547
Slin_0602
KEGG: cak:Caul_0966 hypothetical protein.
  
     0.518
Slin_1514
Hypothetical protein; KEGG: oca:OCAR_5944 BNR/Asp-box repeat domain protein.
  
 
   0.515
Slin_1913
KEGG: hypothetical protein.
 
 
   0.510
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.