STRINGSTRING
Slin_5108 protein (Spirosoma linguale) - STRING interaction network
"Slin_5108" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5108Hypothetical protein (387 aa)    
Predicted Functional Partners:
Slin_4662
Hypothetical protein (409 aa)
   
          0.772
Slin_3396
Phosphoesterase (928 aa)
   
          0.762
Slin_6217
40-residue YVTN family beta-propeller repeat-containing protein (829 aa)
   
          0.738
Slin_1280
Penicillin-binding protein transpeptidase (1323 aa)
   
          0.692
Slin_4223
Hypothetical protein (542 aa)
   
          0.676
Slin_3122
Hypothetical protein (437 aa)
   
          0.675
Slin_3421
RagB/SusD domain-containing protein (521 aa)
   
          0.633
Slin_4086
FAD linked oxidase (539 aa)
   
          0.627
Slin_0587
Hypothetical protein (1393 aa)
   
          0.619
Slin_3419
RagB/SusD domain-containing protein (521 aa)
   
          0.615
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]