STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5109TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: rpi:Rpic_0350 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)    
Predicted Functional Partners:
Slin_4424
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_5136 3-hydroxyacyl-CoA dehydrogenase.
 
 0.999
Slin_6109
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: pla:Plav_0465 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
 
 0.999
Slin_1533
3-oxoacid CoA-transferase, B subunit; KEGG: dar:Daro_1021 butyryl-CoA:acetate CoA transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; 3- oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; Belongs to the 3-oxoacid CoA-transferase family.
 
 0.956
Slin_1026
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: gme:Gmet_2075 acyl-CoA dehydrogenase-like.
  
 0.952
Slin_1392
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: dat:HRM2_03010 acyl-CoA dehydrogenase (ACAD) / acyl-CoA oxidase-like protein.
  
 0.952
Slin_1632
PFAM: carboxyl transferase; KEGG: mxa:MXAN_1113 propionyl-CoA carboxylase, beta subunit.
  
 0.931
Slin_0070
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bav:BAV0216 3-hydroxybutyryl-CoA dehydrogenase.
 
 
 0.929
Slin_3023
Hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: hydroxymethylglutaryl-CoA lyase; K01640 hydroxymethylglutaryl-CoA lyase.
  
 
 0.925
Slin_0612
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: ara:Arad_8405 3-hydroxybutyryl-CoA dehydrogenase protein.
 
 0.919
Slin_2669
KEGG: acetoacetyl-CoA thiolase; K00626 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.916
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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