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Slin_5146 protein (Spirosoma linguale) - STRING interaction network
"Slin_5146" - Electron transporter SCO1/SenC in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5146Electron transporter SCO1/SenC (228 aa)    
Predicted Functional Partners:
Slin_5144
Hypothetical protein (267 aa)
 
          0.950
Slin_5145
Hypothetical protein (199 aa)
 
          0.936
Slin_5678
Hypothetical protein (180 aa)
          0.849
Slin_5143
Hypothetical protein (182 aa)
              0.695
Slin_5142
Hypothetical protein (107 aa)
              0.695
Slin_1875
Hypothetical protein (147 aa)
 
 
  0.626
Slin_5680
Hypothetical protein (125 aa)
   
          0.620
Slin_5670
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (373 aa)
 
 
 
  0.606
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (292 aa)
 
   
  0.593
Slin_5147
HAD-superfamily hydrolase (282 aa)
              0.573
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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