STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5163Two component regulator propeller domain protein; KEGG: mxa:MXAN_6150 sensor histidine kinase. (774 aa)    
Predicted Functional Partners:
tdk
PFAM: thymidine kinase; KEGG: hypothetical protein.
       0.796
Slin_1629
Hypothetical protein.
  
     0.775
Slin_5949
KEGG: sfu:Sfum_4007 hypothetical protein.
  
     0.775
Slin_6621
KEGG: hypothetical protein.
  
     0.694
Slin_4282
Hypothetical protein.
  
     0.666
Slin_5950
Hypothetical protein; KEGG: mmw:Mmwyl1_0481 filamentous haemagglutinin outer membrane protein.
  
     0.657
Slin_0807
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pfo:Pfl01_5133 PpiC-type peptidyl-prolyl cis- trans isomerase.
  
     0.650
Slin_2875
Hypothetical protein.
  
     0.649
Slin_6385
Hypothetical protein; KEGG: gur:Gura_2036 fibronectin, type III domain- containing protein.
  
     0.585
Slin_4435
PFAM: outer membrane chaperone Skp (OmpH); KEGG: aav:Aave_1832 outer membrane chaperone Skp (OmpH).
  
     0.560
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.