STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5180PFAM: glycosyl transferase family 2; KEGG: gur:Gura_2348 glycosyl transferase family protein. (322 aa)    
Predicted Functional Partners:
Slin_5383
PFAM: glycosyl transferase family 2; KEGG: sat:SYN_02665 glycosyltransferase.
  
     0.767
Slin_1670
PFAM: glycosyl transferase family 2; KEGG: dde:Dde_0843 cell wall biosynthesis glycosyltransferase-like protein.
  
     0.764
Slin_4928
PFAM: glycosyl transferase family 2; KEGG: vsa:VSAL_I3027 putative glycosyltransferase.
  
     0.764
Slin_4932
PFAM: glycosyl transferase family 2; KEGG: fph:Fphi_1478 glycosyl transferase family protein.
  
     0.764
Slin_4931
PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3219 glycosyl transferase family protein.
  
     0.760
Slin_2592
PFAM: glycosyl transferase family 2; KEGG: rma:Rmag_0889 glycosyl transferase family protein.
 
     0.748
Slin_2458
PFAM: glycosyl transferase family 2; KEGG: nmu:Nmul_A0297 glycosyl transferase family protein.
  
    0.712
Slin_4093
PFAM: glycosyl transferase family 2; KEGG: dal:Dalk_1973 glycosyl transferase family 2.
  
     0.664
Slin_2465
PFAM: glycosyl transferase family 2; KEGG: ajs:Ajs_0556 glycosyl transferase family protein.
  
     0.600
Slin_5182
KEGG: bte:BTH_I3215 hypothetical protein.
 
   
 0.580
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.