STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5188PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; Oxidoreductase FAD-binding domain protein; Ferric reductase NAD binding; KEGG: azo:azo0308 phenylacetic acid degradation NADH oxidoreductase PaaE. (356 aa)    
Predicted Functional Partners:
Slin_2320
TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vcj:VCD_001976 glutamate synthase [NADPH] small chain.
   
 0.946
Slin_5128
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; Oxidoreductase FAD-binding domain protein; KEGG: sde:Sde_2886 putative phenylacetic acid degradation NADH oxidoreductase.
 
  
0.932
Slin_0629
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cti:RALTA_A3047 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.923
Slin_3078
PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: pmy:Pmen_1573 MOSC domain-containing protein.
 
    0.909
Slin_4133
PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: pmy:Pmen_1573 MOSC domain-containing protein.
 
    0.909
Slin_0451
PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein.
 
 0.898
Slin_6268
PFAM: Nitric oxide synthase NOS; FAD-binding domain protein; flavodoxin/nitric oxide synthase; globin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: NOS; nitric oxide synthase; K00491 nitric-oxide synthase.
  
 
 0.845
Slin_0804
KEGG: spe:Spro_0245 protein tyrosine/serine phosphatase.
    
 
 0.832
Slin_1497
Cysteine desulfurase; PFAM: aminotransferase class V; KEGG: hypothetical protein.
  
 0.762
Slin_4051
Cysteine desulfurase; PFAM: aminotransferase class V; KEGG: kpe:KPK_1257 cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.762
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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