STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5306PFAM: metallophosphoesterase; KEGG: afw:Anae109_3838 metallophosphoesterase. (295 aa)    
Predicted Functional Partners:
Slin_5304
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: zgc:56068.
 
   
 0.835
Slin_5450
PFAM: small multidrug resistance protein; KEGG: bid:Bind_1965 small multidrug resistance protein.
 
    0.661
Slin_5054
PFAM: regulatory protein TetR; KEGG: dal:Dalk_2333 transcriptional regulator, TetR family.
  
     0.625
Slin_1597
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sfu:Sfum_3484 redoxin domain protein.
  
     0.592
Slin_5412
KEGG: ade:Adeh_2330 hypothetical protein.
  
     0.591
Slin_1485
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: dal:Dalk_3428 tetratricopeptide TPR_2 repeat protein.
 
     0.586
Slin_2966
PFAM: PKD domain containing protein; Fibronectin type III domain protein; SMART: PKD domain containing protein; KEGG: gur:Gura_3011 LamG domain-containing protein.
  
     0.579
Slin_4954
PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor.
  
     0.572
Slin_2143
SMART: Helix-turn-helix, AraC domain; KEGG: sbl:Sbal_2330 helix-turn-helix domain- containing protein.
  
     0.569
Slin_2160
Peptidase-like protein; KEGG: rfr:Rfer_1105 phospholipase/carboxylesterase.
 
     0.531
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.