STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5309PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ilo:IL2101 amidohydrolase. (543 aa)    
Predicted Functional Partners:
Slin_0262
KEGG: amc:MADE_02647 Xaa-Pro aminopeptidase family enzyme.
 
     0.736
Slin_5308
Hypothetical protein.
 
     0.729
Slin_4490
KEGG: pat:Patl_1102 hypothetical protein.
  
     0.698
Slin_6557
KEGG: hypothetical protein.
  
  
 0.633
Slin_3251
PFAM: peptidase S10 serine carboxypeptidase; KEGG: amc:MADE_01964 serine carboxypeptidase.
 
    0.619
Slin_5307
Hypothetical protein.
       0.557
Slin_6132
PFAM: aminotransferase class V; KEGG: bja:blr1280 putative isopenicillin N epimerase.
  
     0.530
Slin_3250
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pha:PSHAb0171 putative hydrolase.
 
     0.480
Slin_5739
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: ilo:IL0517 acylaminoacyl-peptidase.
 
     0.467
Slin_5850
KEGG: sse:Ssed_1732 hypothetical protein.
  
     0.465
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.