STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5396PFAM: protein of unknown function DUF820. (190 aa)    
Predicted Functional Partners:
Slin_0341
PFAM: protein of unknown function DUF820; KEGG: noc:Noc_1566 hypothetical protein.
  
     0.773
Slin_1596
PFAM: protein of unknown function DUF820.
  
     0.773
Slin_2896
PFAM: protein of unknown function DUF820; KEGG: hypothetical protein.
  
     0.773
Slin_1327
PFAM: protein of unknown function DUF820; KEGG: noc:Noc_2546 hypothetical protein.
  
     0.705
Slin_0414
PFAM: protein of unknown function DUF820; KEGG: noc:Noc_2546 hypothetical protein.
  
     0.657
Slin_0735
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: vei:Veis_0067 xylose isomerase domain- containing protein.
  
     0.644
Slin_4512
KEGG: afr:AFE_1368 hypothetical protein.
  
     0.590
Slin_4778
PFAM: lipolytic protein G-D-S-L family; KEGG: pat:Patl_0828 lipolytic enzyme, G-D-S-L.
  
     0.585
Slin_4968
PFAM: protein of unknown function DUF820; KEGG: lch:Lcho_2361 hypothetical protein.
  
     0.559
Slin_4779
TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; KEGG: psp:PSPPH_1743 L-sorbosone dehydrogenase.
  
     0.552
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.