STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5459Hypothetical protein. (212 aa)    
Predicted Functional Partners:
Slin_2547
Hypothetical protein.
  
     0.771
Slin_5122
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: ppd:Ppro_1078 TPR repeat-containing protein.
  
     0.755
Slin_0996
Hypothetical protein; KEGG: nis:NIS_1418 glycosyl transferase.
  
     0.733
Slin_5161
KEGG: bpm:BURPS1710b_1566 hypothetical protein.
  
     0.732
Slin_5689
Hypothetical protein; KEGG: sbm:Shew185_0960 MORN repeat-containing protein.
  
     0.728
Slin_3587
KEGG: hypothetical protein.
  
     0.720
Slin_2668
SMART: Tetratricopeptide repeat; KEGG: mxa:MXAN_5661 putative BatC protein.
  
     0.719
Slin_0992
PFAM: surface antigen (D15); KEGG: hch:HCH_05243 outer membrane protein/protective antigen OMA87.
  
     0.688
Slin_0295
Hypothetical protein.
  
     0.672
Slin_6184
Hypothetical protein.
  
     0.670
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.