STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (328 aa)    
Predicted Functional Partners:
Slin_5472
Anthranilate synthase; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; KEGG: bph:Bphy_2698 anthranilate synthase component I.
 0.999
Slin_5473
TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: sml:Smlt4311 putative para-aminobenzoate synthase, glutamine amidotransferase component II.
 
 0.999
trpC
PFAM: Indole-3-glycerol phosphate synthase; KEGG: similar to predicted protein; Belongs to the TrpC family.
  
 0.999
trpF-3
PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: hypothetical protein; K01817 phosphoribosylanthranilate isomerase; Belongs to the TrpF family.
 
 
 0.998
Slin_0655
TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: vei:Veis_1211 anthranilate synthase component II.
  
 0.994
Slin_3444
KEGG: pau:PA14_41820 para-aminobenzoate synthase component I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like.
 0.994
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
 0.989
trpF
PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: lch:Lcho_3196 N- (5'phosphoribosyl)anthranilate isomerase (PRAI); Belongs to the TrpF family.
 
 
 0.983
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
  
 0.980
trpF-2
PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: nwi:Nwi_0056 N-(5'- phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.
  
 
 0.970
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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