Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Slin_0505 | Slin_2001 | Hypothetical protein. | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: SLEI family protein. | 0.658 |
Slin_0505 | Slin_3228 | Hypothetical protein. | Hypothetical protein. | 0.446 |
Slin_0505 | Slin_5096 | Hypothetical protein. | Hypothetical protein; KEGG: ypi:YpsIP31758_4008 putative invasin. | 0.662 |
Slin_0505 | Slin_5597 | Hypothetical protein. | KEGG: hypothetical protein. | 0.708 |
Slin_1365 | Slin_2018 | Hypothetical protein. | Hypothetical protein. | 0.766 |
Slin_1365 | Slin_3219 | Hypothetical protein. | PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: hypothetical protein. | 0.569 |
Slin_1365 | Slin_3228 | Hypothetical protein. | Hypothetical protein. | 0.627 |
Slin_1365 | Slin_5161 | Hypothetical protein. | KEGG: bpm:BURPS1710b_1566 hypothetical protein. | 0.481 |
Slin_1365 | Slin_5597 | Hypothetical protein. | KEGG: hypothetical protein. | 0.690 |
Slin_1365 | Slin_5618 | Hypothetical protein. | KEGG: hypothetical protein. | 0.442 |
Slin_1995 | Slin_2001 | Hypothetical protein; KEGG: ngk:NGK_1616 TonB. | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: SLEI family protein. | 0.702 |
Slin_1995 | Slin_2018 | Hypothetical protein; KEGG: ngk:NGK_1616 TonB. | Hypothetical protein. | 0.702 |
Slin_1995 | Slin_3219 | Hypothetical protein; KEGG: ngk:NGK_1616 TonB. | PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: hypothetical protein. | 0.624 |
Slin_1995 | Slin_5096 | Hypothetical protein; KEGG: ngk:NGK_1616 TonB. | Hypothetical protein; KEGG: ypi:YpsIP31758_4008 putative invasin. | 0.558 |
Slin_1995 | Slin_5161 | Hypothetical protein; KEGG: ngk:NGK_1616 TonB. | KEGG: bpm:BURPS1710b_1566 hypothetical protein. | 0.680 |
Slin_1995 | Slin_5597 | Hypothetical protein; KEGG: ngk:NGK_1616 TonB. | KEGG: hypothetical protein. | 0.700 |
Slin_1995 | Slin_5618 | Hypothetical protein; KEGG: ngk:NGK_1616 TonB. | KEGG: hypothetical protein. | 0.608 |
Slin_2001 | Slin_0505 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: SLEI family protein. | Hypothetical protein. | 0.658 |
Slin_2001 | Slin_1995 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: SLEI family protein. | Hypothetical protein; KEGG: ngk:NGK_1616 TonB. | 0.702 |
Slin_2001 | Slin_2018 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: SLEI family protein. | Hypothetical protein. | 0.704 |
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