STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5638PFAM: SNARE associated Golgi protein; KEGG: GI13424 gene product from transcript GI13424- RA. (223 aa)    
Predicted Functional Partners:
Slin_6086
Hypothetical protein.
  
     0.724
Slin_5235
PFAM: protein of unknown function DUF349; KEGG: hypothetical protein.
  
  
 0.702
Slin_0229
Hypothetical protein; KEGG: geo:Geob_3131 fibronectin type III domain protein.
 
     0.678
Slin_0230
Hypothetical protein; KEGG: geo:Geob_3131 fibronectin type III domain protein.
 
     0.671
Slin_5689
Hypothetical protein; KEGG: sbm:Shew185_0960 MORN repeat-containing protein.
 
     0.669
Slin_5161
KEGG: bpm:BURPS1710b_1566 hypothetical protein.
  
     0.661
Slin_3223
TIGRFAM: gliding motility-associated protein GldM.
  
     0.647
Slin_4429
Hypothetical protein.
  
     0.644
Slin_2013
KEGG: tgr:Tgr7_2227 hypothetical protein.
 
     0.641
Slin_3222
TIGRFAM: gliding motility associated protien GldN; KEGG: hypothetical protein.
  
     0.639
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.