STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5666PFAM: Polysulphide reductase NrfD; KEGG: mxa:MXAN_5556 NrfD family oxidoreductase membrane subunit. (476 aa)    
Predicted Functional Partners:
Slin_5665
KEGG: mxa:MXAN_5557 putative iron-sulfur binding oxidoreductase.
 
 
 0.997
Slin_5667
KEGG: mxa:MXAN_5555 hypothetical protein.
 
 
 
 0.991
Slin_5668
PFAM: cytochrome c class I; KEGG: mxa:MXAN_5554 cytochrome c family protein.
 
 
 
 0.991
Slin_5669
KEGG: mxa:MXAN_5553 hypothetical protein.
 
 
 0.989
Slin_5664
PFAM: cytochrome c class I; KEGG: mxa:MXAN_5558 putative cytochrome c.
 
 
 
 0.983
Slin_5401
PFAM: molybdopterin oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: pap:PSPA7_3527 assimilatory nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.930
Slin_0131
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: met:M446_6438 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.925
Slin_5860
TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mxa:MXAN_4341 oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.925
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.901
Slin_3887
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: msl:Msil_3764 NADH ubiquinone oxidoreductase 20 kDa subunit.
  
  
 0.709
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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