STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5712KEGG: pat:Patl_2615 hypothetical protein. (159 aa)    
Predicted Functional Partners:
Slin_6608
Two component regulator propeller domain protein; KEGG: hypothetical protein.
  
     0.657
Slin_5230
PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: avi:Avi_5260 hypothetical protein.
  
     0.641
Slin_5627
Anthranilate phosphoribosyltransferase-like protein; KEGG: similar to phosphoribosylanthranilate transferase.
  
     0.618
Slin_4778
PFAM: lipolytic protein G-D-S-L family; KEGG: pat:Patl_0828 lipolytic enzyme, G-D-S-L.
  
     0.593
Slin_5393
KEGG: avi:Avi_5260 hypothetical protein.
  
     0.577
Slin_4115
Hypothetical protein; KEGG: Muc19; mucin 19.
  
     0.570
Slin_1069
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
     0.563
Slin_5589
Putative phage repressor; PFAM: Peptidase S24, S26A and S26B, conserved region; SMART: helix-turn-helix domain protein; KEGG: sbn:Sbal195_2020 putative phage repressor.
  
     0.552
Slin_6613
KEGG: acp:A2cp1_4362 hypothetical protein.
  
     0.551
Slin_4316
KEGG: hypothetical protein.
  
     0.548
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.