STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5726PFAM: Glycoside hydrolase 97; KEGG: slo:Shew_2298 putative alpha-glucosidase. (656 aa)    
Predicted Functional Partners:
Slin_2469
PFAM: Glycoside hydrolase 97; KEGG: sde:Sde_2499 putative alpha-glucosidase.
  
  
 
0.928
Slin_0058
PFAM: Glycoside hydrolase 97; KEGG: sfr:Sfri_1777 alpha-glucosidase.
  
  
 
0.923
Slin_3183
PFAM: PfkB domain protein; KEGG: pha:PSHAb0209 putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
  0.917
Slin_1258
PFAM: glycoside hydrolase family 3 domain protein; KEGG: tau:Tola_1809 glycoside hydrolase family 3 domain protein.
    
 0.905
Slin_2687
PFAM: glycoside hydrolase family 3 domain protein; KEGG: pin:Ping_0139 glycoside hydrolase family 3 protein.
   
 0.905
Slin_5124
KEGG: sat:SYN_01069 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
    
 0.905
Slin_1747
PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: nme:NMB0390 maltose phosphorylase.
    
  0.904
Slin_0347
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ank:AnaeK_4258 alpha amylase catalytic region.
   
 0.903
Slin_1907
PFAM: glycoside hydrolase clan GH-D; KEGG: melibiase, putative.
    
 0.903
Slin_3114
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rlt:Rleg2_1908 alpha amylase catalytic region.
   
 0.903
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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