STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5735Hypothetical protein. (275 aa)    
Predicted Functional Partners:
Slin_2325
SMART: Helix-turn-helix, AraC domain; KEGG: mmw:Mmwyl1_3635 helix-turn-helix domain- containing protein.
  
     0.570
Slin_2326
PFAM: monooxygenase FAD-binding; KEGG: hypothetical protein.
  
     0.538
Slin_5736
Hypothetical protein.
       0.517
Slin_1769
PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor.
  
     0.437
Slin_3811
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein.
  
     0.423
Slin_4809
PFAM: Phytanoyl-CoA dioxygenase; KEGG: hypothetical protein.
  
     0.423
Slin_2447
PFAM: Phytanoyl-CoA dioxygenase; KEGG: reu:Reut_B5568 phytanoyl-CoA dioxygenase.
  
     0.421
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.