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Slin_5755 protein (Spirosoma linguale) - STRING interaction network
"Slin_5755" - TonB-dependent siderophore receptor in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5755TonB-dependent siderophore receptor (793 aa)    
Predicted Functional Partners:
Slin_5756
Propeptide PepSY amd peptidase M4 (388 aa)
 
   
  0.950
Slin_1573
PepSY-associated TM helix domain-containing protein (351 aa)
 
   
  0.738
Slin_5757
Superfamily I DNA and RNA helicase and helicase subunits-like protein (1363 aa)
              0.680
Slin_3030
Hypothetical protein (506 aa)
   
          0.677
Slin_3961
Hypothetical protein (520 aa)
   
          0.637
Slin_1219
anti-FecI sigma factor FecR (333 aa)
 
   
  0.616
Slin_1565
Transporter permease (355 aa)
 
   
  0.604
Slin_0022
RagB/SusD domain-containing protein (562 aa)
   
          0.598
Slin_4534
TonB-dependent receptor (779 aa)
 
   
  0.578
Slin_3418
TonB-dependent receptor plug (1076 aa)
   
          0.578
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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