STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5860TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mxa:MXAN_4341 oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (792 aa)    
Predicted Functional Partners:
Slin_5665
KEGG: mxa:MXAN_5557 putative iron-sulfur binding oxidoreductase.
  
 
 0.961
Slin_5666
PFAM: Polysulphide reductase NrfD; KEGG: mxa:MXAN_5556 NrfD family oxidoreductase membrane subunit.
  
 
 0.925
fdhD
Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
  
 0.845
Slin_3562
KEGG: mxa:MXAN_5541 cytochrome c oxidase, cbb3- type, subunit I/II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.746
Slin_2319
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: vvu:VV1_0553 glutamate synthase, large subunit.
  
 
 0.657
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.628
Slin_5669
KEGG: mxa:MXAN_5553 hypothetical protein.
   
 
 0.628
Slin_1751
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ank:AnaeK_3259 Rieske (2Fe-2S) domain protein.
  
 
 0.577
Slin_4885
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: gsu:GSU1650 cytochrome b/b6 complex, iron- sulfur subunit.
  
 
 0.577
Slin_2808
Conserved hypothetical protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
 
   
 0.560
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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