STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5941PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: nha:Nham_0662 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (526 aa)    
Predicted Functional Partners:
Slin_5400
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: rpc:RPC_3765 rubredoxin-type Fe(Cys)4 protein.
  
 
 0.918
Slin_5401
PFAM: molybdopterin oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: pap:PSPA7_3527 assimilatory nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
0.877
Slin_5407
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: pca:Pcar_2879 nitrite reductase (NAD(P)H)subunit.
 
 0.791
Slin_2052
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: apa:APP7_1934 uroporphyrin-III C- methyltransferase.
  
  
 0.767
Slin_5405
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eca:ECA2989 uroporphyrin-III C- methyltransferase.
  
  
 0.767
Slin_5406
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: scl:sce8494 nitrite reductase.
 
 
0.767
Slin_2526
PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ferric reductase domain protein transmembrane component domain; KEGG: msl:Msil_3755 Rieske (2Fe-2S) domain protein.
  
 
 0.764
Slin_1876
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: GI22175 gene product from transcript GI22175- RA.
  
 
 0.728
Slin_6268
PFAM: Nitric oxide synthase NOS; FAD-binding domain protein; flavodoxin/nitric oxide synthase; globin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: NOS; nitric oxide synthase; K00491 nitric-oxide synthase.
  
  
 0.688
Slin_2803
PFAM: iron-containing alcohol dehydrogenase; KEGG: saz:Sama_1640 alcohol dehydrogenase, iron- containing.
  
  
 0.629
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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