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Slin_5984 protein (Spirosoma linguale) - STRING interaction network
"Slin_5984" - Single-strand binding protein in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Slin_5984Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (171 aa)    
Predicted Functional Partners:
Slin_0531
DNA polymerase III subunit alpha (1205 aa)
   
 
  0.983
Slin_6089
DNA polymerase III gamma/tau subunits-like protein (371 aa)
   
 
  0.922
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (703 aa)
 
 
 
  0.903
priA
Primosomal protein N’; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (804 aa)
   
 
 
  0.893
Slin_0023
DNA polymerase III subunits gamma and tau (664 aa)
     
 
  0.891
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (83 aa)
   
   
  0.850
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (124 aa)
   
   
  0.828
Slin_5985
Gliding motility-associated protein GldE (453 aa)
              0.796
Slin_5983
A/G-specific adenine glycosylase (362 aa)
   
   
  0.776
Slin_0543
DNA polymerase I (1024 aa)
 
 
  0.759
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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