STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5985TIGRFAM: gliding motility-associated protein GldE; PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: dal:Dalk_3618 protein of unknown function DUF21. (453 aa)    
Predicted Functional Partners:
Slin_5984
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.685
Slin_6503
PFAM: Integral membrane protein TerC; KEGG: pag:PLES_56441 putative integral membrane transport protein.
 
    0.534
Slin_5986
PFAM: Phytanoyl-CoA dioxygenase; KEGG: cak:Caul_5063 phytanoyl-CoA dioxygenase.
  
    0.530
Slin_5983
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.515
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
 
     0.480
Slin_2798
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: scl:sce8091 cation efflux protein.
      0.419
Slin_5982
PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: similar to DNA-binding protein hu homolog; Belongs to the bacterial histone-like protein family.
     
 0.412
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.