STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6044PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: scl:sce2422 putative metallopeptidase. (649 aa)    
Predicted Functional Partners:
Slin_6043
Hypothetical protein.
       0.631
nuoC-2
NADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
  
    0.508
Slin_0303
Hypothetical protein; KEGG: gme:Gmet_2727 OmpA/MotB.
  
     0.495
Slin_1866
PFAM: peptidase M28; KEGG: pat:Patl_0042 peptidase M28.
  
 
 
 0.470
Slin_4504
PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ilo:IL2328 dipeptidyl aminopeptidase.
  
     0.460
Slin_5492
PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin; KEGG: hypothetical protein.
 
 
 0.449
mscL-2
Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
       0.440
Slin_3438
PFAM: Late embryogenesis abundant protein 2; SMART: Water Stress and Hypersensitive response domain protein; KEGG: hypothetical protein.
  
     0.425
Slin_6549
PFAM: peptidase M28; KEGG: pat:Patl_0042 peptidase M28.
  
 
 
 0.421
Slin_5214
PFAM: peptidase M28; peptidase M20; KEGG: cak:Caul_4272 peptidase M28.
  
 
 
 0.414
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.