Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Slin_0748 | Slin_2547 | KEGG: sat:SYN_01303 hypothetical protein. | Hypothetical protein. | 0.727 |
Slin_0748 | Slin_6060 | KEGG: sat:SYN_01303 hypothetical protein. | PFAM: WD40 domain protein beta Propeller; KEGG: mxa:MXAN_0346 beta-propeller repeat- containing to-pal system protein TolB. | 0.534 |
Slin_2547 | Slin_0748 | Hypothetical protein. | KEGG: sat:SYN_01303 hypothetical protein. | 0.727 |
Slin_2547 | Slin_6060 | Hypothetical protein. | PFAM: WD40 domain protein beta Propeller; KEGG: mxa:MXAN_0346 beta-propeller repeat- containing to-pal system protein TolB. | 0.466 |
Slin_2547 | Slin_6066 | Hypothetical protein. | PFAM: Curlin associated repeat protein; KEGG: sfr:Sfri_1516 curlin associated repeat protein. | 0.584 |
Slin_4677 | Slin_4729 | PFAM: Curlin associated repeat protein; KEGG: spl:Spea_3235 curlin-associated protein. | PFAM: Curli production assembly/transport component CsgF; KEGG: bur:Bcep18194_B2587 hypothetical protein. | 0.791 |
Slin_4677 | Slin_4730 | PFAM: Curlin associated repeat protein; KEGG: spl:Spea_3235 curlin-associated protein. | PFAM: Curli production assembly/transport component CsgG; KEGG: pha:PSHAb0194 putative assembly or transport protein for curli synthesis. | 0.795 |
Slin_4677 | Slin_6060 | PFAM: Curlin associated repeat protein; KEGG: spl:Spea_3235 curlin-associated protein. | PFAM: WD40 domain protein beta Propeller; KEGG: mxa:MXAN_0346 beta-propeller repeat- containing to-pal system protein TolB. | 0.780 |
Slin_4677 | Slin_6061 | PFAM: Curlin associated repeat protein; KEGG: spl:Spea_3235 curlin-associated protein. | PFAM: Curli production assembly/transport component CsgG; KEGG: pha:PSHAb0194 putative assembly or transport protein for curli synthesis. | 0.795 |
Slin_4677 | Slin_6062 | PFAM: Curlin associated repeat protein; KEGG: spl:Spea_3235 curlin-associated protein. | PFAM: Curli production assembly/transport component CsgF; KEGG: bur:Bcep18194_B2587 hypothetical protein. | 0.791 |
Slin_4726 | Slin_4729 | PFAM: Curlin associated repeat protein; KEGG: bur:Bcep18194_B2590 curlin associated protein. | PFAM: Curli production assembly/transport component CsgF; KEGG: bur:Bcep18194_B2587 hypothetical protein. | 0.869 |
Slin_4726 | Slin_4730 | PFAM: Curlin associated repeat protein; KEGG: bur:Bcep18194_B2590 curlin associated protein. | PFAM: Curli production assembly/transport component CsgG; KEGG: pha:PSHAb0194 putative assembly or transport protein for curli synthesis. | 0.858 |
Slin_4726 | Slin_6060 | PFAM: Curlin associated repeat protein; KEGG: bur:Bcep18194_B2590 curlin associated protein. | PFAM: WD40 domain protein beta Propeller; KEGG: mxa:MXAN_0346 beta-propeller repeat- containing to-pal system protein TolB. | 0.770 |
Slin_4726 | Slin_6061 | PFAM: Curlin associated repeat protein; KEGG: bur:Bcep18194_B2590 curlin associated protein. | PFAM: Curli production assembly/transport component CsgG; KEGG: pha:PSHAb0194 putative assembly or transport protein for curli synthesis. | 0.794 |
Slin_4726 | Slin_6062 | PFAM: Curlin associated repeat protein; KEGG: bur:Bcep18194_B2590 curlin associated protein. | PFAM: Curli production assembly/transport component CsgF; KEGG: bur:Bcep18194_B2587 hypothetical protein. | 0.790 |
Slin_4729 | Slin_4677 | PFAM: Curli production assembly/transport component CsgF; KEGG: bur:Bcep18194_B2587 hypothetical protein. | PFAM: Curlin associated repeat protein; KEGG: spl:Spea_3235 curlin-associated protein. | 0.791 |
Slin_4729 | Slin_4726 | PFAM: Curli production assembly/transport component CsgF; KEGG: bur:Bcep18194_B2587 hypothetical protein. | PFAM: Curlin associated repeat protein; KEGG: bur:Bcep18194_B2590 curlin associated protein. | 0.869 |
Slin_4729 | Slin_4730 | PFAM: Curli production assembly/transport component CsgF; KEGG: bur:Bcep18194_B2587 hypothetical protein. | PFAM: Curli production assembly/transport component CsgG; KEGG: pha:PSHAb0194 putative assembly or transport protein for curli synthesis. | 0.987 |
Slin_4729 | Slin_6060 | PFAM: Curli production assembly/transport component CsgF; KEGG: bur:Bcep18194_B2587 hypothetical protein. | PFAM: WD40 domain protein beta Propeller; KEGG: mxa:MXAN_0346 beta-propeller repeat- containing to-pal system protein TolB. | 0.786 |
Slin_4729 | Slin_6061 | PFAM: Curli production assembly/transport component CsgF; KEGG: bur:Bcep18194_B2587 hypothetical protein. | PFAM: Curli production assembly/transport component CsgG; KEGG: pha:PSHAb0194 putative assembly or transport protein for curli synthesis. | 0.968 |
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