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Slin_6060 protein (Spirosoma linguale) - STRING interaction network
"Slin_6060" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6060Hypothetical protein (510 aa)    
Predicted Functional Partners:
Slin_6061
Curli production assembly/transport component CsgG (476 aa)
 
          0.932
Slin_6062
Curli production assembly/transport component CsgF (140 aa)
 
          0.897
Slin_6064
Curlin associated repeat-containing protein (453 aa)
 
          0.793
Slin_4729
Curli production assembly/transport component CsgF (134 aa)
 
          0.789
Slin_4730
Curli production assembly/transport component CsgG (478 aa)
 
          0.778
Slin_4677
Curlin associated repeat-containing protein (392 aa)
   
          0.629
Slin_0869
RagB/SusD domain-containing protein (503 aa)
   
          0.582
Slin_6502
Hypothetical protein (1691 aa)
   
          0.570
Slin_6538
Hypothetical protein (210 aa)
   
          0.546
Slin_0767
Hypothetical protein (218 aa)
   
          0.520
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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