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Slin_6080 protein (Spirosoma linguale) - STRING interaction network
"Slin_6080" - MarR family transcriptional regulator with acetyltransferase activity in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6080MarR family transcriptional regulator with acetyltransferase activity (319 aa)    
Predicted Functional Partners:
Slin_6228
RagB/SusD domain-containing protein (511 aa)
   
          0.684
Slin_4871
Hypothetical protein (151 aa)
   
          0.668
Slin_5238
Hypothetical protein (150 aa)
   
          0.641
Slin_6229
TonB-dependent receptor plug (1137 aa)
   
          0.540
Slin_2617
Outer membrane efflux protein (479 aa)
   
          0.506
Slin_0462
Outer membrane efflux protein (451 aa)
   
          0.489
Slin_6079
Hypothetical protein (196 aa)
              0.472
Slin_2121
Hypothetical protein (1837 aa)
   
          0.450
Slin_2397
Hypothetical protein (571 aa)
   
          0.449
Slin_1221
RagB/SusD domain-containing protein (539 aa)
   
          0.437
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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