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Slin_6105 protein (Spirosoma linguale) - STRING interaction network
"Slin_6105" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6105Hypothetical protein (287 aa)    
Predicted Functional Partners:
Slin_6107
Von Willebrand factor A (359 aa)
 
        0.972
Slin_6106
Hypothetical protein (331 aa)
              0.873
Slin_2939
ATPase AAA (325 aa)
 
   
  0.866
Slin_2667
Von Willebrand factor A (320 aa)
 
        0.863
Slin_1324
ATPase AAA (327 aa)
 
   
  0.849
Slin_0805
ATPase AAA (320 aa)
 
   
  0.847
Slin_4963
ATPase AAA (329 aa)
 
   
  0.821
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (191 aa)
              0.811
Slin_5073
Hypothetical protein (483 aa)
 
          0.664
Slin_6104
Hypothetical protein (112 aa)
              0.635
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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