STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6105KEGG: mxa:MXAN_5665 hypothetical protein. (287 aa)    
Predicted Functional Partners:
Slin_6107
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: hypothetical protein.
 
  
 0.959
Slin_6106
Hypothetical protein.
 
     0.847
Slin_2939
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: nis:NIS_0400 AAA family ATPase.
 
  
 0.826
Slin_0805
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: acp:A2cp1_4423 ATPase associated with various cellular activities AAA_3.
 
  
 0.798
Slin_1324
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: pat:Patl_3493 ATPase.
 
  
 0.793
Slin_2667
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: dps:DP0639 hypothetical protein.
 
    0.788
Slin_4963
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: mxa:MXAN_2475 putative transcriptional regulator.
 
  
 0.780
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
    0.764
Slin_6104
Hypothetical protein.
       0.607
Slin_5073
Hypothetical protein; KEGG: mxa:MXAN_5660 putative BatD protein.
 
     0.578
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.