STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6117KEGG: mno:Mnod_3513 hypothetical protein. (745 aa)    
Predicted Functional Partners:
Slin_6118
PFAM: Aegerolysin; KEGG: pae:PA0122 hypothetical protein.
       0.705
Slin_6116
KEGG: CH211-217K17.8; hypothetical LOC798921.
       0.527
Slin_6119
PFAM: Tail Collar domain protein; KEGG: mno:Mnod_4880 tail collar domain protein.
       0.463
Slin_6114
KEGG: hypothetical protein.
       0.444
Slin_6115
Hypothetical protein; KEGG: eum:ECUMN_0527 adhesin for cattle intestine colonization.
       0.444
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.