STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6209KEGG: gme:Gmet_3467 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain. (621 aa)    
Predicted Functional Partners:
Slin_3112
KEGG: sfu:Sfum_2351 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 0.993
Slin_5282
KEGG: sfu:Sfum_2351 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; 4-alpha- glucanotransferase; PFAM: glycoside hydrolase family 77; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 0.977
Slin_3114
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rlt:Rleg2_1908 alpha amylase catalytic region.
 
 
 0.976
Slin_4791
KEGG: ppd:Ppro_3263 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 
0.971
Slin_4792
Trehalose-phosphatase; KEGG: scl:sce0488 Alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase family 20; trehalose- phosphatase.
 
 0.955
Slin_5014
Alpha,alpha-trehalase; PFAM: glycoside hydrolase family 37; KEGG: cja:CJA_0284 trehalase, putative, tre37A.
   
 
 0.922
Slin_6048
Alpha,alpha-trehalase; PFAM: glycoside hydrolase family 37; KEGG: cja:CJA_0284 trehalase, putative, tre37A.
   
 
 0.922
Slin_3113
KEGG: sfu:Sfum_2349 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain.
  
  
 
0.902
Slin_5281
KEGG: sfu:Sfum_2349 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain.
  
  
 
0.902
Slin_0399
TIGRFAM: trehalose synthase-fused possible maltokinase; KEGG: gbm:Gbem_0136 trehalose synthase.
  
 0.820
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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