STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6222PFAM: regulatory protein TetR; KEGG: rme:Rmet_4887 transcriptional regulator, TetR family. (186 aa)    
Predicted Functional Partners:
Slin_6223
Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.655
Slin_3677
PFAM: regulatory protein TetR; KEGG: reh:H16_B0900 transcriptional regulator.
  
     0.643
Slin_6221
Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: sde:Sde_3037 glycosyl hydrolase.
       0.527
Slin_6224
PFAM: protein of unknown function DUF1348; KEGG: xau:Xaut_1147 hypothetical protein.
 
     0.486
Slin_6225
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: azc:AZC_1334 putative pyridoxine 5`-phosphate oxidase protein.
 
     0.472
Slin_4138
PFAM: regulatory protein TetR; KEGG: afr:AFE_2209 transcriptional regulator, TetR family.
  
     0.430
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.