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Slin_6222 protein (Spirosoma linguale) - STRING interaction network
"Slin_6222" - TetR family transcriptional regulator in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6222TetR family transcriptional regulator (186 aa)    
Predicted Functional Partners:
Slin_6224
Hypothetical protein (149 aa)
 
          0.728
Slin_6223
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity (179 aa)
 
          0.645
Slin_6221
beta-N-acetylhexosaminidase (795 aa)
              0.593
Slin_3677
TetR family transcriptional regulator (196 aa)
 
          0.584
Slin_6225
Pyridoxamine 5’-phosphate oxidase-like FMN-binding protein (206 aa)
 
          0.567
Slin_5507
TetR family transcriptional regulator (219 aa)
   
          0.549
Slin_4138
TetR family transcriptional regulator (203 aa)
   
          0.466
Slin_6220
Hypothetical protein (79 aa)
              0.446
Slin_6219
PilT protein domain-containing protein (129 aa)
              0.446
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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