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Slin_6258 protein (Spirosoma linguale) - STRING interaction network
"Slin_6258" - N-6 DNA methylase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6258N-6 DNA methylase (787 aa)    
Predicted Functional Partners:
Slin_6260
Restriction modification system DNA specificity domain-containing protein (441 aa)
 
 
  0.992
Slin_6264
Type III restriction protein res subunit (1016 aa)
 
   
  0.959
Slin_3089
Restriction modification system DNA specificity domain-containing protein (520 aa)
 
 
  0.918
Slin_6259
Hypothetical protein (335 aa)
            0.904
Slin_3460
Filamentation induced by cAMP protein fic (258 aa)
 
 
      0.526
Slin_6262
Hypothetical protein (124 aa)
              0.523
Slin_6261
Hypothetical protein (112 aa)
              0.523
Slin_6340
SMC domain-containing protein (420 aa)
 
          0.473
Slin_6257
Hypothetical protein (159 aa)
              0.470
Slin_4575
Filamentation induced by cAMP protein fic (377 aa)
     
      0.466
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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