STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6296PFAM: transferase hexapeptide repeat containing protein; KEGG: pfs:PFLU3670 putative acyl transferase, colanic acid synthesis. (184 aa)    
Predicted Functional Partners:
Slin_6297
PFAM: glycosyl transferase group 1; KEGG: pna:Pnap_3183 glycosyl transferase, group 1.
    0.891
Slin_6295
PFAM: glycosyl transferase family 2; KEGG: pna:Pnap_3181 glycosyl transferase family protein.
 
    0.811
Slin_0723
PFAM: transferase hexapeptide repeat containing protein; KEGG: rec:RHECIAT_CH0000844 putative fusion protein: glycosyltransferase and acetyltransferase.
  
     0.771
Slin_1952
Acetyltransferase; KEGG: apj:APJL_0918 acetyltransferase.
  
     0.767
Slin_6293
PFAM: glycosyl transferase group 1; KEGG: pfs:PFLU3666 putative glycosyltransferase.
 
    0.718
Slin_6300
KEGG: pfs:PFLU3672 hypothetical protein.
 
     0.715
Slin_6294
Hypothetical protein.
       0.650
Slin_6301
PFAM: glycosyl transferase group 1; KEGG: pfs:PFLU3673 putative glycosyltransferase.
 
    0.615
Slin_6298
KEGG: tgr:Tgr7_2098 hypothetical protein.
 
     0.605
Slin_6299
PFAM: glycosyl transferase group 1; KEGG: cti:RALTA_B0037 putative glycosyl transferase.
 
    0.580
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.