STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6454Hypothetical protein. (231 aa)    
Predicted Functional Partners:
Slin_3224
TIGRFAM: gliding motility-associated protein GldL; KEGG: hypothetical protein.
 
   
 0.819
Slin_6621
KEGG: hypothetical protein.
  
   
 0.809
Slin_3223
TIGRFAM: gliding motility-associated protein GldM.
 
   
 0.808
Slin_3226
TIGRFAM: putative membrane protein.
 
   
 0.797
Slin_0660
Hypothetical protein.
 
   
 0.779
Slin_5950
Hypothetical protein; KEGG: mmw:Mmwyl1_0481 filamentous haemagglutinin outer membrane protein.
  
   
 0.778
Slin_4282
Hypothetical protein.
  
     0.773
Slin_5203
PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein.
  
   
 0.773
Slin_0229
Hypothetical protein; KEGG: geo:Geob_3131 fibronectin type III domain protein.
  
   
 0.766
Slin_0230
Hypothetical protein; KEGG: geo:Geob_3131 fibronectin type III domain protein.
  
   
 0.765
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.