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Slin_6502 protein (Spirosoma linguale) - STRING interaction network
"Slin_6502" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6502Hypothetical protein (1691 aa)    
Predicted Functional Partners:
Slin_6501
Surface antigen (D15) (808 aa)
 
          0.972
Slin_2314
DoxX family protein (380 aa)
   
          0.703
Slin_1743
XRE family transcriptional regulator (402 aa)
   
          0.702
Slin_5031
Hypothetical protein (103 aa)
   
          0.697
Slin_3400
TonB-dependent receptor plug (1057 aa)
   
          0.695
Slin_4221
RagB/SusD domain-containing protein (457 aa)
   
          0.691
Slin_0801
TonB-dependent receptor plug (1116 aa)
   
          0.679
Slin_6054
RagB/SusD domain-containing protein (499 aa)
   
          0.675
Slin_0021
TonB-dependent receptor (976 aa)
   
          0.667
Slin_0022
RagB/SusD domain-containing protein (562 aa)
   
          0.653
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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