STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6516PFAM: protein of unknown function DUF305; KEGG: pcr:Pcryo_1836 hypothetical protein. (218 aa)    
Predicted Functional Partners:
Slin_4201
KEGG: scl:sce3534 hypothetical protein.
  
     0.591
Slin_6515
PFAM: rhodopsin; KEGG: vha:VIBHAR_02160 hypothetical protein.
       0.588
Slin_6514
PFAM: protein of unknown function DUF62; KEGG: ecg:E2348C_4114 hypothetical protein.
       0.584
Slin_0758
KEGG: bid:Bind_0502 hypothetical protein.
  
     0.570
Slin_3322
PFAM: Cupin 2 conserved barrel domain protein; KEGG: rlt:Rleg2_5757 allantoin catabolism protein.
  
     0.560
Slin_1844
PFAM: sodium/hydrogen exchanger; KEGG: cak:Caul_1264 sodium/hydrogen exchanger.
  
     0.526
Slin_0490
Hypothetical protein; KEGG: dac:Daci_5804 cell surface receptor IPT/TIG domain-containing protein.
  
     0.523
Slin_3488
Hypothetical protein; KEGG: predicted gene, 672682.
  
     0.516
Slin_1746
Hypothetical protein.
  
     0.503
Slin_4180
TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF303 acetylesterase putative; protein of unknown function DUF11; KEGG: predicted gene, 672682.
  
     0.492
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.