STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6585PFAM: ROK family protein; KEGG: ftw:FTW_0827 ROK family protein. (278 aa)    
Predicted Functional Partners:
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: dal:Dalk_1023 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.913
Slin_2990
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: scl:sce4837 putative phosphoglucomutase/phosphomannomutase.
  
 
 0.910
Slin_1235
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.906
Slin_2977
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.906
Slin_3046
PFAM: Aldose 1-epimerase; KEGG: vsp:VS_II1385 galactose mutarotase and related enzymes.
    
 0.905
Slin_2711
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpd:RPD_2835 HAD family hydrolase.
   
 
  0.904
Slin_0624
Beta-galactosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: sde:Sde_1285 beta-galactosidase/beta- glucuronidase-like; Belongs to the glycosyl hydrolase 2 family.
     
 0.902
Slin_1719
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: cja:CJA_0532 beta-galactosidase, putative, bgl2B; Belongs to the glycosyl hydrolase 2 family.
     
 0.902
Slin_4039
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: xac:XAC4250 beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
     
 0.902
Slin_2303
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0443 glucose 1-dehydrogenase.
  
 
  0.836
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.