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Slin_6585 protein (Spirosoma linguale) - STRING interaction network
"Slin_6585" - ROK family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6585ROK family protein (278 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase (552 aa)
       
  0.943
Slin_2990
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I (585 aa)
 
   
  0.927
Slin_1719
Glycoside hydrolase family protein (922 aa)
       
  0.910
Slin_0624
Beta-galactosidase (894 aa)
       
  0.910
Slin_3046
Aldose 1-epimerase (345 aa)
       
  0.907
Slin_1235
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (387 aa)
       
  0.907
Slin_4384
Xylose isomerase (446 aa)
       
  0.885
Slin_0349
Xylose isomerase (443 aa)
       
  0.885
Slin_3027
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (221 aa)
   
  0.829
Slin_0348
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (219 aa)
   
  0.829
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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