STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6607KEGG: hypothetical protein. (743 aa)    
Predicted Functional Partners:
Slin_6614
PFAM: PhoPQ-activated pathogenicity-related protein PqaA type; KEGG: noc:Noc_1356 hypothetical protein.
 
     0.790
Slin_6603
PFAM: metallophosphoesterase; KEGG: dat:HRM2_13400 putative phosphohydrolase.
 
     0.783
Slin_6612
Hypothetical protein.
  
     0.774
Slin_6611
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor.
  
     0.772
Slin_6613
KEGG: acp:A2cp1_4362 hypothetical protein.
  
     0.770
Slin_6608
Two component regulator propeller domain protein; KEGG: hypothetical protein.
 
    
0.748
Slin_2260
KEGG: hypothetical protein.
  
     0.707
Slin_6606
PFAM: HpcH/HpaI aldolase; KEGG: rfr:Rfer_1241 2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
     0.687
Slin_0965
TIGRFAM: heme-binding protein; KEGG: pca:Pcar_0624 L-sorbosone dehydrogenase.
  
     0.641
Slin_6589
PFAM: dihydrodipicolinate synthetase; KEGG: hypothetical protein; Belongs to the DapA family.
 
     0.640
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.