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Slin_6609 protein (Spirosoma linguale) - STRING interaction network
"Slin_6609" - ECF subfamily RNA polymerase sigma-24 subunit in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6609ECF subfamily RNA polymerase sigma-24 subunit (180 aa)    
Predicted Functional Partners:
Slin_5489
ECF subfamily RNA polymerase sigma-24 subunit (189 aa)
   
          0.765
Slin_1017
ECF subfamily RNA polymerase sigma-24 subunit (200 aa)
   
          0.761
Slin_6032
ECF subfamily RNA polymerase sigma-24 subunit (199 aa)
   
          0.722
Slin_3339
ECF subfamily RNA polymerase sigma-24 subunit (172 aa)
   
          0.680
Slin_4193
ECF subfamily RNA polymerase sigma-24 subunit (200 aa)
   
          0.628
Slin_0974
ECF subfamily RNA polymerase sigma-24 subunit (190 aa)
   
          0.628
Slin_0072
ECF subfamily RNA polymerase sigma-24 subunit (154 aa)
   
          0.599
Slin_6612
Hypothetical protein (546 aa)
 
          0.550
Slin_6611
TonB-dependent receptor plug (1137 aa)
 
          0.510
Slin_6610
Hypothetical protein (65 aa)
              0.508
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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