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Slin_6633 protein (Spirosoma linguale) - STRING interaction network
"Slin_6633" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6633Hypothetical protein (613 aa)    
Predicted Functional Partners:
Slin_5269
Fibronectin type III domain-containing protein (1633 aa)
   
          0.657
Slin_4723
NHL repeat containing protein (1079 aa)
   
          0.471
Slin_5291
Peptidase C1A papain (354 aa)
   
          0.468
Slin_6632
DNA/RNA non-specific endonuclease (289 aa)
 
          0.429
Slin_1351
Esterase (298 aa)
   
          0.418
Slin_3715
Histidine kinase (695 aa)
   
          0.414
Slin_2523
Major intrinsic protein (279 aa)
   
          0.411
Slin_3450
6-pyruvoyl-tetrahydropterin synthase (138 aa)
   
          0.405
Slin_0417
Hypothetical protein (389 aa)
   
          0.405
Slin_6371
O-methyltransferase family 2 (351 aa)
   
          0.402
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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