STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cu1070Hypothetical protein. (413 aa)    
Predicted Functional Partners:
cu0117
Putative secreted protein.
  
     0.772
cu0279
Prolipoprotein LppL.
 
     0.742
cu0511
Hypothetical protein.
  
     0.711
cu1695
Hypothetical protein.
  
     0.707
cu1636
Putative secreted protein.
  
     0.700
cu1782
Conserved hypothetical protein.
  
     0.695
cu1069
Hypothetical protein.
       0.672
cu0556
Putative membrane protein.
  
     0.666
cu0387
Conserved hypothetical protein.
  
    0.654
cu1067
Transporter of the HlyC/CorC family.
 
    0.645
Your Current Organism:
Corynebacterium urealyticum
NCBI taxonomy Id: 504474
Other names: C. urealyticum DSM 7109, Corynebacterium urealyticum ATCC 43042, Corynebacterium urealyticum CIP 103524, Corynebacterium urealyticum DSM 7109, Corynebacterium urealyticum str. DSM 7109, Corynebacterium urealyticum strain DSM 7109
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