STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cu1298Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. (397 aa)    
Predicted Functional Partners:
cu1297
RNase H domain-containing protein; Unnamed protein product; Belongs to the phosphoglycerate mutase family.
  
  
 0.953
cu1299
Putative phosphoglycolate phosphatase.
       0.643
cu1300
Low molecular weight protein-tyrosine-phosphatase.
  
    0.570
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
  
 0.568
pat
Aromatic amino acid aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.568
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.526
cu0866
Unnamed protein product; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.521
cu0377
Phosphomethylpyrimidine kinase.
  
    0.516
cu1578
Hypothetical protein.
  
  
 0.514
cu0048
Para-aminobenzoate synthase component I.
       0.504
Your Current Organism:
Corynebacterium urealyticum
NCBI taxonomy Id: 504474
Other names: C. urealyticum DSM 7109, Corynebacterium urealyticum ATCC 43042, Corynebacterium urealyticum CIP 103524, Corynebacterium urealyticum DSM 7109, Corynebacterium urealyticum str. DSM 7109, Corynebacterium urealyticum strain DSM 7109
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