Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cu0187 | cu1586 | cu0187 | cu1586 | Putative universal stress protein. | Putative ABC transport system, permease protein. | 0.666 |
cu0187 | cu1844 | cu0187 | cu1844 | Putative universal stress protein. | Putative permease of the major facilitator superfamily. | 0.449 |
cu0187 | cu1888 | cu0187 | cu1888 | Putative universal stress protein. | Hypothetical protein. | 0.505 |
cu1187 | cu1888 | cu1187 | cu1888 | Hypothetical protein. | Hypothetical protein. | 0.444 |
cu1586 | cu0187 | cu1586 | cu0187 | Putative ABC transport system, permease protein. | Putative universal stress protein. | 0.666 |
cu1586 | cu1888 | cu1586 | cu1888 | Putative ABC transport system, permease protein. | Hypothetical protein. | 0.456 |
cu1844 | cu0187 | cu1844 | cu0187 | Putative permease of the major facilitator superfamily. | Putative universal stress protein. | 0.449 |
cu1844 | cu1888 | cu1844 | cu1888 | Putative permease of the major facilitator superfamily. | Hypothetical protein. | 0.489 |
cu1886 | cu1888 | cu1886 | cu1888 | Hypothetical protein; Nucleoside-diphosphate-sugar epimerases. | Hypothetical protein. | 0.470 |
cu1886 | hemH | cu1886 | cu1887 | Hypothetical protein; Nucleoside-diphosphate-sugar epimerases. | Hypothetical protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.878 |
cu1886 | sigC | cu1886 | cu1885 | Hypothetical protein; Nucleoside-diphosphate-sugar epimerases. | ECF-family sigma factor C; Belongs to the sigma-70 factor family. ECF subfamily. | 0.663 |
cu1888 | cu0187 | cu1888 | cu0187 | Hypothetical protein. | Putative universal stress protein. | 0.505 |
cu1888 | cu1187 | cu1888 | cu1187 | Hypothetical protein. | Hypothetical protein. | 0.444 |
cu1888 | cu1586 | cu1888 | cu1586 | Hypothetical protein. | Putative ABC transport system, permease protein. | 0.456 |
cu1888 | cu1844 | cu1888 | cu1844 | Hypothetical protein. | Putative permease of the major facilitator superfamily. | 0.489 |
cu1888 | cu1886 | cu1888 | cu1886 | Hypothetical protein. | Hypothetical protein; Nucleoside-diphosphate-sugar epimerases. | 0.470 |
cu1888 | hemH | cu1888 | cu1887 | Hypothetical protein. | Hypothetical protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.470 |
cu1888 | sigC | cu1888 | cu1885 | Hypothetical protein. | ECF-family sigma factor C; Belongs to the sigma-70 factor family. ECF subfamily. | 0.403 |
hemH | cu1886 | cu1887 | cu1886 | Hypothetical protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Hypothetical protein; Nucleoside-diphosphate-sugar epimerases. | 0.878 |
hemH | cu1888 | cu1887 | cu1888 | Hypothetical protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Hypothetical protein. | 0.470 |
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